- name: pneumocat-bactopia_help
  command: bash -c 'nextflow run ./main.nf --wf pneumocat -c nextflow.config --help > pneumocat-help.txt'
  tags:
    - bactopia_help
    - pneumocat
  files:
    - path: pneumocat-help.txt
      contains: ['pneumocat', 'bactopia', 'version', 'dependencies']
