{
    "$schema": "http://json-schema.org/draft-07/schema",
    "$id": "https://raw.githubusercontent.com/bactopia/bactopia/master/modules/nf-core/abricate/run/params.json",
    "title": "Abricate Module",
    "description": "A module for mass screening of contigs for antimicrobial and virulence genes",
    "type": "object",
    "definitions": {
        "abricate_parameters": {
            "title": "Abricate Parameters",
            "type": "object",
            "description": "",
            "default": "",
            "fa_icon": "fas fa-exclamation-circle",
            "properties": {
                "abricate_db": {
                    "type": "string",
                    "default": "ncbi",
                    "description": "Database to use",
                    "fa_icon": "fas fa-expand-arrows-alt"
                },
                "minid": {
                    "type": "integer",
                    "default": 80,
                    "description": "Minimum DNA percent identity",
                    "fa_icon": "fas fa-expand-arrows-alt"
                },
                "mincov": {
                    "type": "integer",
                    "default": 80,
                    "description": "Minimum DNA percent coverage",
                    "fa_icon": "fas fa-expand-arrows-alt"
                }
            }
        }
    },
    "allOf": [
        {
            "$ref": "#/definitions/abricate_parameters"
        }
    ]
}
