- name: ismapper-bactopia_help
  command: bash -c 'nextflow run ./main.nf --wf ismapper -c nextflow.config --help > ismapper-help.txt'
  tags:
    - bactopia
    - bactopia_help
    - ismapper
  files:
    - path: ismapper-help.txt
      contains: ['ismapper', 'bactopia', 'version', 'dependencies']
