{
    "$schema": "http://json-schema.org/draft-07/schema",
    "$id": "https://raw.githubusercontent.com/bactopia/bactopia/master/modules/nf-core/quast/params.json",
    "title": "Quast module",
    "description": "A module for assessing the quality of assembled contigs",
    "type": "object",
    "definitions": {
        "quast_parameters": {
            "title": "Quast Parameters",
            "type": "object",
            "description": "",
            "default": "",
            "fa_icon": "fas fa-exclamation-circle",
            "properties": {
                "contig_thresholds": {
                    "type": "string",
                    "default": "0,1000,10000,100000,250000,1000000",
                    "description": "Comma-separated list of contig length thresholds",
                    "fa_icon": "fas fa-align-justify"
                },
                "plots_format": {
                    "type": "string",
                    "default": "pdf",
                    "description": "Save plots in specified format",
                    "fa_icon": "fas fa-boxes",
                    "hidden": true,
                    "enum": [
                        "emf",
                        "eps",
                        "pdf",
                        "png",
                        "ps",
                        "raw",
                        "rgba",
                        "svg",
                        "svgz"
                    ]
                }
            }
        }
    },
    "allOf": [
        {
            "$ref": "#/definitions/quast_parameters"
        }
    ]
}
