- name: mykrobe-bactopia_help
  command: bash -c 'nextflow run ./main.nf --wf mykrobe -c nextflow.config --help > mykrobe-help.txt'
  tags:
    - bactopia_help
    - mykrobe
  files:
    - path: mykrobe-help.txt
      contains: ['mykrobe', 'bactopia', 'version', 'dependencies']
