- name: genotyphi-bactopia_help
  command: bash -c 'nextflow run ./main.nf --wf genotyphi -c nextflow.config --help > genotyphi-help.txt'
  tags:
    - bactopia_help
    - genotyphi
  files:
    - path: genotyphi-help.txt
      contains: ['genotyphi', 'bactopia', 'version', 'dependencies']
