- name: kraken-bactopia_help
  command: bash -c 'nextflow run ./main.nf --wf kraken2 -c nextflow.config --help > kraken2-help.txt'
  tags:
    - bactopia_help
    - kraken2
  files:
    - path: kraken2-help.txt
      contains: ['kraken2', 'bactopia', 'version', 'dependencies']
