- name: assembler-bactopia_help
  command: bash -c 'nextflow run ./main.nf --wf assembler -c nextflow.config --help > assembler-help.txt'
  tags:
    - bactopia_help_disable
    - assembler_disable
  files:
    - path: assembler-help.txt
      contains: ['assembler', 'bactopia', 'version', 'dependencies']
