- name: mcroni-bactopia_help
  command: bash -c 'nextflow run ./main.nf --wf mcroni -c nextflow.config --help > mcroni-help.txt'
  tags:
    - bactopia_help
    - mcroni
  files:
    - path: mcroni-help.txt
      contains: ['mcroni', 'bactopia', 'version', 'dependencies']
