- name: abricate-bactopia_help
  command: bash -c 'nextflow run ./main.nf --wf abricate -c nextflow.config --help > abricate-help.txt'
  tags:
    - bactopia_help
    - abricate
  files:
    - path: abricate-help.txt
      contains: ['abricate', 'bactopia', 'version', 'dependencies']
