{
    "$schema": "http://json-schema.org/draft-07/schema",
    "$id": "https://raw.githubusercontent.com/bactopia/bactopia/master/modules/nf-core/meningotype/params.json",
    "title": "meningotype Module",
    "description": "A module for serotyping of Neisseria meningitidis",
    "type": "object",
    "definitions": {
        "meningotype_parameters": {
            "title": "meningotype Parameters",
            "type": "object",
            "description": "You can use these parameters to fine-tune your meningotype analysis",
            "default": "",
            "fa_icon": "fas fa-exclamation-circle",
            "properties": {
                "finetype": {
                    "type": "boolean",
                    "default": false,
                    "description": "perform porA and fetA fine typing",
                    "fa_icon": "fas fa-expand-arrows-alt"
                },
                "porB": {
                    "type": "boolean",
                    "default": false,
                    "description": "perform porB sequence typing (NEIS2020)",
                    "fa_icon": "fas fa-expand-arrows-alt"
                },
                "bast": {
                    "type": "boolean",
                    "default": false,
                    "description": "perform Bexsero antigen sequence typing (BAST)",
                    "fa_icon": "fas fa-expand-arrows-alt"
                },
                "mlst": {
                    "type": "boolean",
                    "default": false,
                    "description": "perform MLST",
                    "fa_icon": "fas fa-expand-arrows-alt"
                },
                "all": {
                    "type": "boolean",
                    "default": false,
                    "description": "perform MLST, porA, fetA, porB, BAST typing",
                    "fa_icon": "fas fa-expand-arrows-alt"
                }
            }
        }
    },
    "allOf": [
        {
            "$ref": "#/definitions/meningotype_parameters"
        }
    ]
}
