- name: rgi-bactopia_help
  command: bash -c 'nextflow run ./main.nf --wf rgi -c nextflow.config --help > rgi-help.txt'
  tags:
    - bactopia_help
    - rgi
  files:
    - path: rgi-help.txt
      contains: ['rgi', 'bactopia', 'version', 'dependencies']
