- name: scoary-bactopia_help
  command: bash -c 'nextflow run ./main.nf --wf scoary -c nextflow.config --help > scoary-help.txt'
  tags:
    - skip_scoary
  files:
    - path: scoary-help.txt
      contains: ['scoary', 'bactopia', 'version', 'dependencies']
