- name: shigeifinder-bactopia_help
  command: bash -c 'nextflow run ./main.nf --wf shigeifinder -c nextflow.config --help > shigeifinder-help.txt'
  tags:
    - bactopia_help
    - shigeifinder
  files:
    - path: shigeifinder-help.txt
      contains: ['shigeifinder', 'bactopia', 'version', 'dependencies']
