.vscode/

simulation-study/data/output/*.csv
simulation-study/data/est_data_output/*.csv
simulation-study/data/D_std0.csv
empirical-study/data/
software/

# Condor files
simulation-study/condor/errors/
simulation-study/condor/logs/
simulation-study/condor/outputs/
simulation-study/condor/inphynet-proj/
simulation-study/condor/tables/estimated_gts.tab
simulation-study/condor/transfer-files/
simulation-study/condor/test_run.sub
simulation-study/condor/test_run2.sub

# MacOS files
*.DS_store

# Files generated by invoking Julia with --code-coverage
*.jl.cov
*.jl.*.cov

# Files generated by invoking Julia with --track-allocation
*.jl.mem

# System-specific files and directories generated by the BinaryProvider and BinDeps packages
# They contain absolute paths specific to the host computer, and so should not be committed
deps/deps.jl
deps/build.log
deps/downloads/
deps/usr/
deps/src/

# Build artifacts for creating documentation generated by the Documenter package
docs/build/
docs/site/

# File generated by Pkg, the package manager, based on a corresponding Project.toml
# It records a fixed state of all packages used by the project. As such, it should not be
# committed for packages, but should be committed for applications that require a static
# environment.
Manifest.toml

# So that CRLF changes don't get committed everytime switching between Mac and Windows
relevant-reading/*

# Simulation data
old-sims/n40h4/data/*
old-sims/n40h4/*
old-sims/report/*
old-sims/
*treefile*
simulation-study/simulation-scripts/data/*
simulation-study/simulation-scripts/data/temp_data/*

# Julia
artifacts/
logs/
compiled/
benchmarks/
packages/
registries/
scratchspaces/
