{% for d in range(discovered|length) %} {% for i in range(discovered[d]|length) %} {% endfor %} {% for i in range(discovered[d]|length) %} {% endfor %} {% for i in range(discovered[d]|length) %} {% endfor %} {% for i in range(discovered[d]|length) %} {% endfor %} {% for i in range(discovered[d]|length) %} {% endfor %} {% for i in range(discovered[d]|length) %} {% endfor %}

Discovered motif
Label	D{{ d_indices[d][i] }}
Logos
	Learned PWM
	Reverse complement
# sequences used	{{ used_sequences[d_indices[d][i]-1] }}
relative distance

{% endfor %}

Pair occurence:

• (Di,Dj) is the number of co-occuring motif where the number of nucleotides in between them is specified by the number indicated on the slider below
• (Di, Dj) also specifies the order of occurence of both motifs
• For each setting, the pairs of motifs that have number of co-occurence lower is 30 is omitted
• The "occurence" is set if a motif scores above the (highest) score threshold set by p-value=.005

Number of co-occuring motifs if there are less than

10

nucleotides in between both motifs.