TestResults-class           package:limma           R Documentation

_M_a_t_r_i_x _o_f _T_e_s_t _R_e_s_u_l_t_s - _c_l_a_s_s

_D_e_s_c_r_i_p_t_i_o_n:

     A matrix-based class for storing the results of simultanous tests.
     'TestResults' objects are normally created by 'classifyTestsF',
     'classifyTestsT' or 'classifyTestsP'.

_U_s_a_g_e:

     ## S3 method for class 'TestResults':
     summmary{object, ...)}

_A_r_g_u_m_e_n_t_s:

  object: object of class 'TestResults'

     ...: other arguments are not used

_S_l_o_t_s/_L_i_s_t _C_o_m_p_o_n_e_n_t_s:

     'TestResults' objects can be created by
     'new("TestResults",results)' where 'results' is a matrix. Objects
     of this class contain no slots (other than '.Data'), although the
     attributes 'dim' and 'dimnames' may be treated as slots.

_M_e_t_h_o_d_s:

     This class inherits directly from class 'matrix' so any operation
     appropriate for matrices will work on objects of this class.
     'show' and 'summary' methods are also implemented.

     Functions in LIMMA which operate on 'TestResults' objects include
     'heatDiagram', 'vennCounts', 'vennDiagram'.

_A_u_t_h_o_r(_s):

     Gordon Smyth

_S_e_e _A_l_s_o:

     2.Classes gives an overview of all the classes defined by this
     package.

