# Inferring Cell-Specific Gene Regulatory Network

## Documentation for package ‘inferCSN’ version 0.99.8

- DESCRIPTION file.

## Help Pages

inferCSN-package | inferCSN: Inferring Cell-Specific Gene Regulatory Network
acc.calculate | ACC calculate
auc.calculate | AUC value calculate
check.parameters | Check input parameters
coef.inferCSN | Extracts a specific solution in the regularization path
coef.inferCSNCV | Extracts a specific solution in the regularization path
compute.gene.rank | Compute and rank TFs in network
contrast.networks | contrast.networks
dynamic.networks | Plot of dynamic networks
exampleGroundTruth | Example ground truth data
exampleMatrix | Example matrix data
inferCSN | Inferring Cell-Specific Gene Regulatory Network
inferCSN-method | Inferring Cell-Specific Gene Regulatory Network
inferCSN.fit | Fit a sparse regression model
is.scalar | is.scalar
net.format | Format weight table
network.heatmap | The heatmap of network
predict.inferCSN | Predict Response
predict.inferCSNCV | Predict Response
print.inferCSN | Prints a summary of inferCSN.fit
print.inferCSNCV | Prints a summary of inferCSN.fit
sparse.regression | Sparse regression model
sub.inferCSN | Sparse regression model for single gene