# Visually Exploring Random Forests

## Documentation for package ‘ggRandomForests’ version 2.2.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

ggRandomForests-package | ggRandomForests: Visually Exploring Random Forests
calc_auc | Area Under the ROC Curve calculator
calc_auc.gg_roc | Area Under the ROC Curve calculator
calc_roc | Receiver Operator Characteristic calculator
calc_roc.randomForest | Receiver Operator Characteristic calculator
calc_roc.rfsrc | Receiver Operator Characteristic calculator
combine.gg_partial | combine two gg_partial objects
combine.gg_partial_list | combine two gg_partial objects
gg_error | randomForest error rate data object
gg_error.randomForest | randomForest error rate data object
gg_error.randomForest.formula | randomForest error rate data object
gg_error.rfsrc | randomForest error rate data object
gg_interaction | Minimal Depth Variable Interaction data object ('find.interaction').
gg_interaction.randomForest | Minimal Depth Variable Interaction data object ('find.interaction').
gg_interaction.rfsrc | Minimal Depth Variable Interaction data object ('find.interaction').
gg_minimal_depth | Minimal depth data object ('[randomForestSRC]{var.select}')
gg_minimal_depth.randomForest | Minimal depth data object ('[randomForestSRC]{var.select}')
gg_minimal_depth.rfsrc | Minimal depth data object ('[randomForestSRC]{var.select}')
gg_minimal_vimp | Minimal depth vs VIMP comparison by variable rankings.
gg_minimal_vimp.randomForest | Minimal depth vs VIMP comparison by variable rankings.
gg_minimal_vimp.rfsrc | Minimal depth vs VIMP comparison by variable rankings.
gg_partial | Partial variable dependence object
gg_partial.randomForest | Partial variable dependence object
gg_partial.rfsrc | Partial variable dependence object
gg_partial_coplot | Data structures for stratified partial coplots
gg_partial_coplot.rfsrc | Data structures for stratified partial coplots
gg_partial_list | Partial variable dependence object
gg_rfsrc | Predicted response data object
gg_rfsrc.rfsrc | Predicted response data object
gg_roc | ROC (Receiver operator curve) data from a classification random forest.
gg_roc.randomForest | ROC (Receiver operator curve) data from a classification random forest.
gg_roc.rfsrc | ROC (Receiver operator curve) data from a classification random forest.
gg_survival | Nonparametric survival estimates.
gg_variable | Marginal variable dependence data object.
gg_variable.random | Marginal variable dependence data object.
gg_variable.randomForest | Marginal variable dependence data object.
gg_variable.rfsrc | Marginal variable dependence data object.
gg_vimp | Variable Importance (VIMP) data object
gg_vimp.randomForest | Variable Importance (VIMP) data object
gg_vimp.randomForest.formula | Variable Importance (VIMP) data object
gg_vimp.rfsrc | Variable Importance (VIMP) data object
kaplan | nonparametric Kaplan-Meier estimates
nelson | nonparametric Nelson-Aalen estimates
plot.gg_error | Plot a 'gg_error' object
plot.gg_interaction | plot.gg_interaction Plot a 'gg_interaction' object,
plot.gg_minimal_depth | Plot a 'gg_minimal_depth' object for random forest variable ranking.
plot.gg_minimal_vimp | Plot a 'gg_minimal_vimp' object for comparing the Minimal Depth and VIMP variable rankings.
plot.gg_partial | Partial variable dependence plot, operates on a 'gg_partial' object.
plot.gg_partial_list | Partial variable dependence plot, operates on a 'gg_partial_list' object.
plot.gg_rfsrc | Predicted response plot from a 'gg_rfsrc' object.
plot.gg_roc | ROC plot generic function for a 'gg_roc' object.
plot.gg_survival | Plot a 'gg_survival' object.
plot.gg_variable | Plot a 'gg_variable' object,
plot.gg_vimp | Plot a 'gg_vimp' object, extracted variable importance of a 'rfsrc' object
print.gg_minimal_depth | Print a 'gg_minimal_depth' object.
quantile_pts | Find points evenly distributed along the vectors values.
shift | lead function to shift by one (or more).
surface_matrix | Construct a set of (x, y, z) matrices for surface plotting a 'gg_partial_coplot' object
surface_matrix.gg_partial_coplot | Construct a set of (x, y, z) matrices for surface plotting a 'gg_partial_coplot' object