# A Clustering Method for Time-Series Whole-Brain Activity Data of 'C. elegans'

## Documentation for package ‘WormTensor’ version 0.1.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

AllGenerics_component | Components for WormTensor object
as_worm_tensor | Generates WormTensor object A WormTensor object is generated from distance matrices.
WormTensor-class | S4 class used by as_worm_tensor.R, worm_membership.R, worm_clustering.R, worm_evaluate.R, worm_visualize.R
worm_clustering | Components for WormTensor object
worm_clustering-method | Generates clustering result A clustering result is generated from a membership tensor.
worm_distance | Generates distance matrices Distance matrices are generated between the cells of multiple animals (Caenorhabditis elegans) from time-series matrices.
worm_download | Downloads distance matrices 28 animals' data including 24 normal and 4 noisy are retrieved from figshare.
worm_evaluate | Components for WormTensor object
worm_evaluate-method | Evaluates clustering result An evaluation result is generated from a WormTensor object.
worm_membership | Components for WormTensor object
worm_membership-method | Generates membership tensor A membership tensor is generated from distance matrices.
worm_visualize | Components for WormTensor object
worm_visualize-method | Plots evaluation result A visualization result is generated from a WormTensor object.