# Fast, Sensitive, and Accurate Integration of Single Cell Data

## Documentation for package ‘harmony’ version 0.1.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

cell_lines | List of metadata table and scaled PCs matrix
cell_lines_small | Same as cell_lines but smaller (300 cells).
harmony | Harmony: fast, accurate, and robust single cell integration.
HarmonyMatrix | Main Harmony interface
moe_ridge_get_betas | Get beta Utility
RunHarmony | Harmony single cell integration
RunHarmony.Seurat | Harmony single cell integration
RunHarmony.SingleCellExperiment | Harmony single cell integration