# Reproducible, Accessible & Shareable Species Distribution Modelling

## Documentation for package ‘zoon’ version 0.6.5

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

AplumbeusOcc | UK occurrence data for Anopheles plumbeus as taken from GBIF
BuildModule | BuildModule
cbindZoon | cbindZoon
Chain | Chain modules together
ChangeWorkflow | Change a workflow and rerun.
CombineRasters | Combine rasters
Covariate | Accessor functions for getting module outputs from a workflow object
CWBZim | Presence/absence of the coffee white stem borer in Zimbabwe 2003
ExtractAndCombData | ExtractAndCombData
FindExtent | Determine the Extent of Interest
FrescaloBias | Example bias raster for plants in England
GetMaxEnt | Get MaxEnt
GetModuleList | GetModuleList
GetPackage | Helper to install (if needed) and load a package
LoadModule | A function to load a module function from url or disk.
Model | Accessor functions for getting module outputs from a workflow object
ModuleArguments | ModuleArguments
ModuleHelp | ModuleHelp
Occurrence | Accessor functions for getting module outputs from a workflow object
Output | Accessor functions for getting module outputs from a workflow object
plot.zoonWorkflow | Plot a schematic illustration of a zoon workflow structure.
print.zoonCitation | A function to print zoonCitation
print.zoonWorkflow | A function to print a zoonWorkflow object
Process | Accessor functions for getting module outputs from a workflow object
Replicate | Replicate a module multiple times
RerunWorkflow | Rerun a workflow object.
RunModels | RunModels
subsetColumnsZoon | subsetColumnsZoon
summary.zoonWorkflow | A function to summarize the output of a zoon workflow
TransformCRS | Change the CRS of occurrence data
UKAirRas | UK Air temperature raster layer.
workflow | Run a full workflow.
zoon | Zoon: A package for comparing multiple SDM models, good model diagnostics and better reproducibility
ZoonCitation | ZoonCitation
ZoonFigshare | ZoonFigshare
ZoonModel | ZoonModel
ZoonModuleParse | Parse a module file to read roxygen tags
ZoonPredict | ZoonPredict