Package: epos
Type: Package
Title: Epilepsy Ontologies' Similarities
Version: 1.0
Author: Bernd Mueller
Maintainer: Bernd Mueller <bernd.mueller@zbmed.de>
Description: Analysis and visualization of similarities between epilepsy ontologies based on text mining results by comparing ranked lists of co-occurring drug terms in the BioASQ corpus. The ranked result lists of neurological drug terms co-occurring with terms from the epilepsy ontologies EpSO, ESSO, EPILONT, EPISEM and FENICS undergo further analysis. The source data to create the ranked lists of drug names is produced using the text mining workflows described in Mueller, Bernd and Hagelstein, Alexandra (2016) <doi:10.4126/FRL01-006408558>, Mueller, Bernd et al. (2017) <doi:10.1007/978-3-319-58694-6_22> and Mueller, Bernd and Rebholz-Schuhmann, Dietrich (2020) <doi:10.1007/978-3-030-43887-6_52>.
Depends: R (>= 3.6.0)
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Imports: hash, ggplot2, testthat, gridExtra, TopKLists, stringr,
        xtable, mongolite, stats, VennDiagram, cowplot
Suggests: knitr, rmarkdown
NeedsCompilation: no
Packaged: 2021-02-19 16:08:32 UTC; Muellerb
Repository: CRAN
Date/Publication: 2021-02-20 01:10:14 UTC
Built: R 4.0.2; ; 2021-02-25 14:54:58 UTC; unix
