# Collection of Correlation and Association Estimators

## Documentation for package ‘matrixCorr’ version 0.11.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

A B C D I K P R S T V W misc

## -- A --

as.data.frame.corr_edge_list | Edge-list data-frame view

## -- B --

ba | Bland-Altman statistics with confidence intervals
ba_rm | Bland-Altman for repeated measurements
bicor | Biweight mid-correlation (bicor)
biserial | Biserial Correlation Between Continuous and Binary Variables
biweight_mid_corr | Deprecated Compatibility Wrappers
bland_altman | Deprecated Compatibility Wrappers
bland_altman_repeated | Deprecated Compatibility Wrappers

## -- C --

ccc | Pairwise Lin's concordance correlation coefficient
ccc_lmm_reml | Deprecated Compatibility Wrappers
ccc_pairwise_u_stat | Deprecated Compatibility Wrappers
ccc_rm_reml | Concordance Correlation via REML (Linear Mixed-Effects Model)
ccc_rm_ustat | Repeated-Measures Lin's Concordance Correlation Coefficient (CCC)

## -- D --

dcor | Pairwise Distance Correlation (dCor)
deprecated-matrixCorr | Deprecated Compatibility Wrappers
diag.bicor | Biweight mid-correlation (bicor)
distance_corr | Deprecated Compatibility Wrappers

## -- I --

icc | Intraclass Correlation for Wide Data
icc_rm_reml | Repeated-Measures Intraclass Correlation via REML

## -- K --

kendall_tau | Pairwise (or Two-Vector) Kendall's Tau Rank Correlation

## -- P --

partial_correlation | Deprecated Compatibility Wrappers
pbcor | Percentage bend correlation
pcorr | Partial correlation matrix (sample / ridge / OAS / graphical lasso)
pearson_corr | Pairwise Pearson correlation
plot.ba | Bland-Altman statistics with confidence intervals
plot.ba_repeated | Bland-Altman for repeated measurements
plot.ba_repeated_matrix | Bland-Altman for repeated measurements
plot.bicor | Biweight mid-correlation (bicor)
plot.biserial_corr | Biserial Correlation Between Continuous and Binary Variables
plot.ccc | Pairwise Lin's concordance correlation coefficient
plot.corr_edge_list | S3 Plot for Edge-List Correlation Results
plot.corr_matrix | S3 Plot for Dense Correlation Results
plot.corr_packed_upper | S3 Plot for Packed-Upper Correlation Results
plot.corr_sparse | S3 Plot for Sparse Correlation Results
plot.dcor | Pairwise Distance Correlation (dCor)
plot.kendall_matrix | Pairwise (or Two-Vector) Kendall's Tau Rank Correlation
plot.partial_corr | Partial correlation matrix (sample / ridge / OAS / graphical lasso)
plot.pbcor | Percentage bend correlation
plot.pearson_corr | Pairwise Pearson correlation
plot.polychoric_corr | Pairwise Polychoric Correlation
plot.polyserial_corr | Polyserial Correlation Between Continuous and Ordinal Variables
plot.rmcorr | Methods for Pairwise rmcorr Objects
plot.rmcorr_matrix | Methods for rmcorr Matrix Objects
plot.schafer_corr | Shrinkage Correlation
plot.shrinkage_corr | Shrinkage Correlation
plot.skipped_corr | Pairwise skipped correlation
plot.spearman_rho | Pairwise Spearman's rank correlation
plot.tetrachoric_corr | Pairwise Tetrachoric Correlation
plot.wincor | Pairwise Winsorized correlation
polychoric | Pairwise Polychoric Correlation
polyserial | Polyserial Correlation Between Continuous and Ordinal Variables
print.ba | Bland-Altman statistics with confidence intervals
print.ba_repeated | Bland-Altman for repeated measurements
print.ba_repeated_matrix | Bland-Altman for repeated measurements
print.bicor | Biweight mid-correlation (bicor)
print.biserial_corr | Biserial Correlation Between Continuous and Binary Variables
print.ccc | Pairwise Lin's concordance correlation coefficient
print.ccc_ci | S3 print for legacy class 'ccc_ci'
print.corr_edge_list | Print Edge-List Correlation Results
print.corr_packed_upper | Print Packed-Upper Correlation Results
print.dcor | Pairwise Distance Correlation (dCor)
print.icc | Intraclass Correlation for Wide Data
print.icc_overall | Intraclass Correlation for Wide Data
print.icc_rm_reml | Repeated-Measures Intraclass Correlation via REML
print.kendall_matrix | Pairwise (or Two-Vector) Kendall's Tau Rank Correlation
print.matrixCorr_ccc | Print method for matrixCorr CCC objects
print.matrixCorr_ccc_ci | Print method for matrixCorr CCC objects with CIs
print.partial_corr | Partial correlation matrix (sample / ridge / OAS / graphical lasso)
print.pbcor | Percentage bend correlation
print.pearson_corr | Pairwise Pearson correlation
print.polychoric_corr | Pairwise Polychoric Correlation
print.polyserial_corr | Polyserial Correlation Between Continuous and Ordinal Variables
print.rmcorr | Methods for Pairwise rmcorr Objects
print.rmcorr_matrix | Methods for rmcorr Matrix Objects
print.schafer_corr | Shrinkage Correlation
print.shrinkage_corr | Shrinkage Correlation
print.skipped_corr | Pairwise skipped correlation
print.spearman_rho | Pairwise Spearman's rank correlation
print.summary.ba | Bland-Altman statistics with confidence intervals
print.summary.bicor | Biweight mid-correlation (bicor)
print.summary.biserial_corr | Biserial Correlation Between Continuous and Binary Variables
print.summary.ccc | Pairwise Lin's concordance correlation coefficient
print.summary.ccc_rm_reml | Summary Method for 'ccc_rm_reml' Objects
print.summary.corr_result | Print Standardized Correlation Summaries
print.summary.dcor | Pairwise Distance Correlation (dCor)
print.summary.icc | Intraclass Correlation for Wide Data
print.summary.icc_overall | Intraclass Correlation for Wide Data
print.summary.icc_rm_reml | Repeated-Measures Intraclass Correlation via REML
print.summary.kendall_matrix | Pairwise (or Two-Vector) Kendall's Tau Rank Correlation
print.summary.latent_corr | Summary Method for Latent Correlation Matrices
print.summary.matrixCorr | Summary Method for Correlation Matrices
print.summary.partial_corr | Partial correlation matrix (sample / ridge / OAS / graphical lasso)
print.summary.pbcor | Percentage bend correlation
print.summary.pearson_corr | Pairwise Pearson correlation
print.summary.polychoric_corr | Pairwise Polychoric Correlation
print.summary.polyserial_corr | Polyserial Correlation Between Continuous and Ordinal Variables
print.summary.rmcorr | Methods for Pairwise rmcorr Objects
print.summary.rmcorr_matrix | Methods for rmcorr Matrix Objects
print.summary.skipped_corr | Pairwise skipped correlation
print.summary.spearman_rho | Pairwise Spearman's rank correlation
print.summary.tetrachoric_corr | Pairwise Tetrachoric Correlation
print.summary.wincor | Pairwise Winsorized correlation
print.tetrachoric_corr | Pairwise Tetrachoric Correlation
print.wincor | Pairwise Winsorized correlation

## -- R --

rmcorr | Repeated-Measures Correlation (rmcorr)

## -- S --

schafer_corr | Shrinkage Correlation
shrinkage_corr | Shrinkage Correlation
skipped_corr | Pairwise skipped correlation
skipped_corr_masks | Pairwise skipped correlation
spearman_rho | Pairwise Spearman's rank correlation
summary.ba | Bland-Altman statistics with confidence intervals
summary.bicor | Biweight mid-correlation (bicor)
summary.biserial_corr | Biserial Correlation Between Continuous and Binary Variables
summary.ccc | Pairwise Lin's concordance correlation coefficient
summary.ccc_rm_reml | Summary Method for 'ccc_rm_reml' Objects
summary.corr_edge_list | S3 Summary for Edge-List Correlation Results
summary.corr_matrix | S3 Summary for Dense Correlation Results
summary.corr_packed_upper | S3 Summary for Packed-Upper Correlation Results
summary.corr_sparse | S3 Summary for Sparse Correlation Results
summary.dcor | Pairwise Distance Correlation (dCor)
summary.icc | Intraclass Correlation for Wide Data
summary.icc_overall | Intraclass Correlation for Wide Data
summary.icc_rm_reml | Repeated-Measures Intraclass Correlation via REML
summary.kendall_matrix | Pairwise (or Two-Vector) Kendall's Tau Rank Correlation
summary.partial_corr | Partial correlation matrix (sample / ridge / OAS / graphical lasso)
summary.pbcor | Percentage bend correlation
summary.pearson_corr | Pairwise Pearson correlation
summary.polychoric_corr | Pairwise Polychoric Correlation
summary.polyserial_corr | Polyserial Correlation Between Continuous and Ordinal Variables
summary.rmcorr | Methods for Pairwise rmcorr Objects
summary.rmcorr_matrix | Methods for rmcorr Matrix Objects
summary.schafer_corr | Shrinkage Correlation
summary.shrinkage_corr | Shrinkage Correlation
summary.skipped_corr | Pairwise skipped correlation
summary.spearman_rho | Pairwise Spearman's rank correlation
summary.tetrachoric_corr | Pairwise Tetrachoric Correlation
summary.wincor | Pairwise Winsorized correlation

## -- T --

tetrachoric | Pairwise Tetrachoric Correlation

## -- V --

view_corr_shiny | Interactive Shiny viewer for matrixCorr objects
view_rmcorr_shiny | Interactive Shiny Viewer for Repeated-Measures Correlation

## -- W --

wincor | Pairwise Winsorized correlation

## -- misc --

$.summary.corr_result | Summary Accessor for Correlation Summaries
[[.summary.corr_result | Summary Accessor for Correlation Summaries