@article{Steinkemindata2019,
author = {Steinke, Jonathan and Achieng, Jerusha Onyango and Hammond, James and Kebede, Selamawit Sileshi and Mengistu, Dejene Kassahun and Mgimiloko, Majuto Gaspar and Mohammed, Jemal Nurhisen and Musyoka, Joseph and Sieber, Stefan and {van de Gevel}, Jeske and {van Wijk}, Mark and {van Etten}, Jacob},
doi = {10.1016/j.compag.2019.05.026},
issn = {01681699},
journal = {Computers and Electronics in Agriculture},
keywords = {Agricultural extension,Bradley-Terry model,ICT,Interactive voice response,Targeting},
month = {jul},
pages = {991--1000},
publisher = {Elsevier B.V.},
title = {{Household-specific targeting of agricultural advice via mobile phones: Feasibility of a minimum data approach for smallholder context}},
volume = {162},
year = {2019}
}


@article{MartinBland1986,
  doi = {10.1016/s0140-6736(86)90837-8},
  url = {https://doi.org/10.1016/s0140-6736(86)90837-8},
  year = {1986},
  month = feb,
  publisher = {Elsevier {BV}},
  volume = {327},
  number = {8476},
  pages = {307--310},
  author = {J. Martin Bland and DouglasG. Altman},
  title = {Statistical methods for assessing agreement between two methods of clinical measurement},
  journal = {The Lancet}
}

@article{akaike1974,
title={A new look at the statistical model identification},
author={Akaike, Hirotugu},
journal={IEEE transactions on automatic control},
volume={19},
number={6},
pages={716--723},
year={1974},
publisher={Ieee},
}

@article{Ziliak_2019,
author = {Stephen T. Ziliak},
title = {{How Large Are Your G-Values? Try Gosset’s Guinnessometrics When a Little “p” Is Not Enough}},
journal = {The American Statistician},
volume = {73},
number = {sup1},
pages = {281-290},
year  = {2019},
publisher = {Taylor & Francis},
doi = {10.1080/00031305.2018.1514325},
URL = {https://doi.org/10.1080/00031305.2018.1514325},
eprint = {https://doi.org/10.1080/00031305.2018.1514325},
}


@article{brown2020data,
title={Data synthesis for crop variety evaluation. A review},
  author={Brown, David and {Van den Bergh}, Inge and {de Bruin}, Sytze and Machida, Lewis and {van Etten}, Jacob},
  journal={Agronomy for sustainable development},
  volume={40},
  number={4},
  pages={1--20},
  year={2020},
  publisher={Springer}
}

@article{bradley1952rank,
  title={{Rank analysis of incomplete block designs: I. The method of paired comparisons}},
  author={Bradley, Ralph Allan and Terry, Milton E},
  journal={Biometrika},
  volume={39},
  number={3/4},
  pages={324--345},
  year={1952},
  publisher={JSTOR}
}

@Article{BradleyTerry2,
    title = {{Bradley-Terry Models in {R}: The {BradleyTerry2} Package}},
    author = {Heather Turner and David Firth},
    journal = {Journal of Statistical Software},
    year = {2012},
    volume = {48},
    number = {9},
    pages = {1--21},
    url = {https://www.jstatsoft.org/v48/i09/},
  }

@article{deSousa2021,
  title={Data-driven decentralized breeding increases prediction accuracy in a challenging crop production environment},
  author={{de Sousa}, Kau{\^e} and {van Etten}, Jacob and Poland, Jesse and Fadda, Carlo and Jannink, Jean-Luc and Kidane, Yosef Gebrehawaryat and Lakew, Basazen Fantahun and Mengistu, Dejene Kassahun and P{\`e}, Mario Enrico and Solberg, Svein {\O}ivind and others},
  journal={Communications biology},
  volume={4},
  number={1},
  pages={1--9},
  year={2021},
  publisher={Nature Publishing Group}
}
  
@misc{r_extensions_2022,
  title={Writing R Extensions},
  author={{R Core Team}},
  year={2022},
  publisher={R Foundation for Statistical Computing Vienna, Austria},
  url = {https://cran.r-project.org/doc/manuals/r-release/R-exts.html}
}

@incollection{Coe2002AnalyzingRA,
address = {Mexico City, Mexico},
author = {Coe, Richard},
booktitle = {{Quantitative Analysis of Data from Participatory Methods in Plant Breeding}},
editor = {Bellon, M. R. and {J. Reeves}},
pages = {44--65},
publisher = {CIMMYT},
title = {{Analyzing ranking and rating data from participatory on-farm trials.}},
year = {2002}
}


@article{mcfadden1973conditional,
  title={Conditional logit analysis of qualitative choice behavior},
  author={McFadden, Daniel and others},
  year={1973},
  publisher={Institute of Urban and Regional Development, University of California~…}
}

@article{Kendall_1939,
 ISSN = {00034851},
 URL = {http://www.jstor.org/stable/2235668},
 author = {M. G. Kendall and B. Babington Smith},
 journal = {The Annals of Mathematical Statistics},
 number = {3},
 pages = {275--287},
 publisher = {Institute of Mathematical Statistics},
 title = {The Problem of m Rankings},
 urldate = {2022-06-16},
 volume = {10},
 year = {1939}
}

@article{kendall_1938,
    author = {Kendall, M. G.},
    title = "{A new measure of rank correlation}",
    journal = {Biometrika},
    volume = {30},
    number = {1-2},
    pages = {81-93},
    year = {1938},
    month = {06},
    issn = {0006-3444},
    doi = {10.1093/biomet/30.1-2.81},
    url = {https://doi.org/10.1093/biomet/30.1-2.81},
    eprint = {https://academic.oup.com/biomet/article-pdf/30/1-2/81/423380/30-1-2-81.pdf},
}


@article{deRoo2019farm,
  title={On-farm trials for development impact? The organisation of research and the scaling of agricultural technologies},
  author={De Roo, Nina and Andersson, Jens A and Krupnik, Timothy J},
  journal={Experimental Agriculture},
  volume={55},
  number={2},
  pages={163--184},
  year={2019},
  publisher={Cambridge University Press}
}

@misc{RCoreTeam,
address = {Vienna, Austria},
author = {{R Core Team}},
publisher = {CRAN R Project},
title = {{R: A language and environment for statistical computing. version 4.0.0}},
url = {https://www.r-project.org/},
year = {2020}
}

@article{vanEtten2019,
author = {{van Etten}, Jacob and {de Sousa}, Kau{\^{e}} and Aguilar, Am{\'{i}}lcar and Barrios, Mirna and Coto, Allan and {Dell'Acqua}, Matteo and Fadda, Carlo and Gebrehawaryat, Yosef and {van de Gevel}, Jeske and Gupta, Arnab and Kiros, Afewerki Y. and Madriz, Brandon and Mathur, Prem and Mengistu, Dejene K. and Mercado, Leida and {Nurhisen Mohammed}, Jemal and Paliwal, Ambica and P{\`{e}}, Mario Enrico and Quir{\'{o}}s, Carlos F. and Rosas, Juan Carlos and Sharma, Neeraj and Singh, S. S. and Solanki, Iswhar S. and Steinke, Jonathan},
doi = {10.1073/pnas.1813720116},
issn = {0027-8424},
journal = {Proceedings of the National Academy of Sciences},
mendeley-groups = {tricotgenomic},
month = {feb},
number = {10},
pages = {4194--4199},
publisher = {National Academy of Sciences},
title = {{Crop variety management for climate adaptation supported by citizen science}},
url = {http://www.pnas.org/lookup/doi/10.1073/pnas.1813720116},
volume = {116},
year = {2019}
}

@article{vanetten_beza_2019,
title = {First experiences with a novel farmer citizen science approach: crowdsourcing participatory variety selection through on-farm triadic comparisons of technologies (tricot)},
volume = {55},
DOI = {10.1017/S0014479716000739}, 
number = {S1},
journal = {Experimental Agriculture},
publisher = {Cambridge University Press},
author = {{van Etten}, Jacob and
          Beza, Eskender and 
          Calderer, Lluís and
          Van Duijvendijk, Kees and 
          Fadda, Carlo and
          Fantahun, Basazen and
          Kidane, Yosef Gebrehawaryat and
          Van De Gevel, Jeske and
          Gupta, Arnab and 
          Mengistu, Dejene Kassahun and
          Kiambi, D. A. N. and
          Mathur, Prem Narain and
          Mercado, Leida and
          Mittra, Sarika and
          Mollel, Margaret J. and
          Rosas, Juan Carlos and
          Steinke, Jonathan and
          Suchini, Jose Gabriel and 
          Zimmerer, Karl S.},
          year={2016},
          pages={275–296}
          }
          
@article{Moyo_2021,
author = {Moyo, Mukani and Ssali, Reuben and Namanda, Sam and Nakitto, Mariam and Dery, Eric K. and Akansake, Daniel and Adjebeng-Danquah, Joseph and {{van Etten}}, Jacob and {{de Sousa}}, Kau{\^{e}} and Lindqvist-Kreuze, Hannele and Carey, Edward and Muzhingi, Tawanda},
doi = {10.3389/fsufs.2021.620363},
issn = {2571-581X},
journal = {Frontiers in Sustainable Food Systems},
keywords = {East Africa,Ipomoea batatas,West Africa,crop evaluation,tricot approach,underutilized crops},
month = {feb},
number = {3},
pages = {6},
publisher = {Frontiers Media S.A.},
title = {{Consumer Preference Testing of Boiled Sweetpotato Using Crowdsourced Citizen Science in Ghana and Uganda}},
url = {https://www.frontiersin.org/articles/10.3389/fsufs.2021.620363/full},
volume = {5},
year = {2021}
}


@Article{nasapower,
  author = {Adam H Sparks},
  title = {nasapower: A NASA POWER Global Meteorology, Surface Solar Energy and Climatology Data Client for R},
  doi = {10.21105/joss.01035},
  year = {2018},
  month = {oct},
  publisher = {The Open Journal},
  volume = {3},
  number = {30},
  pages = {1035},
  journal = {The Journal of Open Source Software},
}

@article{lysen2009permuted,
  title={Permuted inclusion criterion: a variable selection technique},
  author={Lysen, Shaun},
  journal={Publicly accessible Penn Dissertations},
  pages={28},
  year={2009}
}


@article{Turner2020,
author = {Heather L Turner and Jacob {van Etten} and David Firth and Ioannis Kosmidis},
doi = {10.1007/s00180-020-00959-3},
issn = {1613-9658},
journal = {Computational Statistics},
mendeley-groups = {tricot-genomic},
title = {{Modelling rankings in R: the PlackettLuce package}},
url = {https://doi.org/10.1007/s00180-020-00959-3},
year = {2020}
}


@article{Lowndes2017,
  doi = {10.1038/s41559-017-0160},
  url = {https://doi.org/10.1038/s41559-017-0160},
  year = {2017},
  month = may,
  publisher = {Springer Science and Business Media {LLC}},
  volume = {1},
  number = {6},
  author = {Julia S. Stewart Lowndes and Benjamin D. Best and Courtney Scarborough and Jamie C. Afflerbach and Melanie R. Frazier and Casey C. O'Hara and Ning Jiang and Benjamin S. Halpern},
  title = {Our path to better science in less time using open data science tools},
  journal = {Nature Ecology \& Evolution}
}

@article{Plackett,
 ISSN = {00359254, 14679876},
 URL = {http://www.jstor.org/stable/2346567},
 author = {R. L. Plackett},
 journal = {Journal of the Royal Statistical Society. Series C (Applied Statistics)},
 number = {2},
 doi = {10.2307/2346567},
 pages = {193--202},
 publisher = {[Wiley, Royal Statistical Society]},
 title = {The Analysis of Permutations},
 urldate = {2022-06-15},
 volume = {24},
 year = {1975}
}

@book{luce_individual_1959,
author = {Luce, R. Duncan},
mendeley-groups = {phd-thesis},
pages = {153},
publisher = {Courier Corporation},
title = {{Individual Choice Behavior}},
year = {1959}
}

@article{Zeileis2008,
author = {Achim Zeileis and Torsten Hothorn and Kurt Hornik},
title = {Model-Based Recursive Partitioning},
journal = {Journal of Computational and Graphical Statistics},
volume = {17},
number = {2},
pages = {492-514},
year  = {2008},
publisher = {Taylor & Francis},
doi = {10.1198/106186008X319331},
URL = {https://doi.org/10.1198/106186008X319331},
eprint = {https://doi.org/10.1198/106186008X319331}
}


@article{Loomes_1982,
    author = {Loomes, Graham and Sugden, Robert},
    title = "{{Regret Theory: An Alternative Theory of Rational Choice Under Uncertainty}}",
    journal = {The Economic Journal},
    volume = {92},
    number = {368},
    pages = {805-824},
    year = {1982},
    month = {12},
    issn = {0013-0133},
    doi = {10.2307/2232669},
    url = {https://doi.org/10.2307/2232669},
    eprint = {https://academic.oup.com/ej/article-pdf/92/368/805/27197060/ej0805.pdf},
}

@article{Bleichrodt_2015,
    author = {Bleichrodt, Han and Wakker, Peter P.},
    title = "{Regret Theory: A Bold Alternative to the Alternatives}",
    journal = {The Economic Journal},
    volume = {125},
    number = {583},
    pages = {493-532},
    year = {2015},
    month = {03},
    issn = {0013-0133},
    doi = {10.1111/ecoj.12200},
    url = {https://doi.org/10.1111/ecoj.12200},
    eprint = {https://academic.oup.com/ej/article-pdf/125/583/493/26439316/ej0493.pdf},
}


@article{eskridge_1992,
	title = {Choosing plant cultivars based on the probability of outperforming a check},
	volume = {84},
	issn = {1432-2242},
	url = {https://doi.org/10.1007/BF00229512},
	doi = {10.1007/BF00229512},
	number = {3},
	journal = {Theoretical and Applied Genetics},
	author = {Eskridge, K. M. and Mumm, R. F.},
	month = jul,
	year = {1992},
	pages = {494--500},
}

@Book{ggplot2,
    author = {Hadley Wickham},
    title = {{ggplot2}: Elegant Graphics for Data Analysis},
    publisher = {Springer-Verlag New York},
    year = {2016},
    isbn = {978-3-319-24277-4},
    url = {https://ggplot2.tidyverse.org},
  }


@Manual{climatrends,
    title = {{climatrends}: Climate Variability Indices for Ecological Modelling},
    author = {Kauê {de Sousa} and Jacob {van Etten} and Svein Ø. Solberg},
    year = {2020},
    note = {R package version 0.2},
    url = {https://CRAN.R-project.org/package=climatrends},
  }

@Manual{ag5tools,
    title = {ag5Tools: Toolbox for Downloading and Extracting Copernicus AgERA5 Data},
    author = {David Brown and Kauê {de Sousa}},
    note = {R package version 0.0.2},
    url = {https://agrdatasci.github.io/ag5Tools/},
    year = 2022 
  }

@Article{chirps,
    title = {{chirps: API Client for the CHIRPS Precipitation Data in R}},
    author = {Kauê {de Sousa} and Adam H. Sparks and William Ashmall and Jacob {van Etten} and Svein Ø. Solberg},
    year = {2020},
    doi = {10.21105/joss.02419},
    journal = {The Journal of Open Source Software},
    publisher = {The Open Journal},
    volume = {5},
    number = {51},
    pages = {2419},
    url = {https://doi.org/10.21105/joss.02419},
  }
  
@article{Funk2015,
author = {Funk, Chris and Peterson, Pete and Landsfeld, Martin and Pedreros, Diego and Verdin, James and Shukla, Shraddhanand and Husak, Gregory and Rowland, James and Harrison, Laura and Hoell, Andrew and Michaelsen, Joel},
doi = {10.1038/sdata.2015.66},
journal = {Scientific Data},
month = {dec},
pages = {150066},
publisher = {Macmillan Publishers Limited},
title = {{The climate hazards infrared precipitation with stations—a new environmental record for monitoring extremes}},
url = {http://dx.doi.org/10.1038/sdata.2015.66},
volume = {2},
year = {2015}
}

@techreport{boogaard_2020,
	title = {Agrometeorological indicators from 1979 to present derived from reanalysis},
	author = {Boogaard, Hendrik and van der Grijn, Gerald},
	editor = {Wageningen Environmental Research},
	year = {2020},
}


@inproceedings{brownlegacydata,
address = {Salt Lake City, USA},
author = {Brown, David and Carpentier, Sebastien and {de Bruin}, Sytze and {de Sousa}, Kau{\^{e}} and Machida, Lewis and {van Etten}, Jacob},
booktitle = {ASA/CSSA/SSSA International Annual Meeting},
title = {{Combining legacy data from heterogeneous crop trials to identify genotype by environment interactions using model-based recursive partitioning}},
url = {https://hdl.handle.net/10568/117614},
year = {2021}
}

