funMoDisco-package	funMoDisco-package
.check_fits	dot-check_fits
.diss_d0_d1_L2	dot-diss_d0_d1_L2
.domain	dot-domain
.find_min_diss	dot-find_min_diss
.find_occurrences	dot-find_occurrences
.generate_coefficients	dot-generate_coefficients
.mapply_custom	dot-mapply_custom
.resample	dot-resample
.select_domain	dot-select_domain
.transform_list	dot-transform_list
.transform_to_matrix	dot-transform_to_matrix
add_error_to_motif	add_error_to_motif
add_motif	add_motif
cluster_candidate_motifs	cluster_candidate_motifs
cluster_candidate_motifs_plot	cluster_candidate_motifs_plot
compare_nodes	compare_nodes
discoverMotifs	discoverMotifs
filter_candidate_motifs	filter_candidate_motifs
find_recommended_path	find_recommended_path
funMoDisco	funMoDisco-package
generateCurves	generateCurves
generateCurves,motifSimulation-method	generateCurves-motifSimulation-method
generate_background_curve	generate_background_curve
generate_curve_vector	generate_curve_vector
get_accolites	get_accolites
get_minidend	get_minidend
get_parents	get_parents
get_path_complete	get_path_complete
initialChecks	initialChecks
motifSimulation-class	motifSimulation-class
motifSimulationBuilder	motifSimulationBuilder
motifs_search	motifs_search
motifs_search_plot	motifs_search_plot
padding	padding
plot_motifs	plot_motifs
plot_motifs,motifSimulation-method	plot_motifs-motifSimulation-method
ProbKMA	ProbKMA
probKMA_plot	probKMA_plot
probKMA_silhouette_filter	probKMA_silhouette_filter
probKMA_silhouette_plot	probKMA_silhouette_plot
probKMA_wrap	probKMA_wrap
recommend_node	recommend_node
simulated200	simulated200
simulatedHighDimensional	simulatedHighDimensional
to_motifDiscovery	to_motifDiscovery
to_motifDiscovery,list-method	to_motifDiscovery-list-method
