AddFossilPoints	AddFossilPoints
AddStratIntervals	AddStratIntervals
generateMiSSEGreedyCombinations	generateMiSSEGreedyCombinations
GeoHiSSE	GeoHiSSE
GeoHiSSE.old	GeoHiSSE.old
GetAICWeights	GetAICWeights
GetFossils	GetFossils
GetModelAveRates	modelAveRates
hisse	hisse
hisse.null4.old	hisseNull4.old
hisse.old	hisse.old
makeGeoHiSSELikelihood	makeGeoHiSSELikelihood
makeHiSSELikelihood	makeHiSSELikelihood
MarginRecon.old	marginRecon.old
MarginReconGeoSSE	marginReconGeoSSE
MarginReconGeoSSE.old	marginReconGeoSSE.old
MarginReconHiSSE	marginReconHiSSE
MarginReconMiSSE	marginReconMiSSE
MarginReconMuHiSSE	marginReconMuHiSSE
MiSSE	MiSSE
MiSSEGreedy	MiSSEGreedy
MiSSENet	MiSSENet
MuHiSSE	MuHiSSE
ParDrop	transMat
ParEqual	transMat
plot.geohisse.states	plotGeoHiSSE
plot.hisse.states	plotHisse
plot.misse.states	plotMiSSE
plot.muhisse.states	plotMuHiSSE
PlotMisseSpace	PlotMisseSpace
ProcessSimSample	ProcessSimSample
ProcessSimStrat	ProcessSimStrat
PruneRedundantModels	PruneRedundantModels
SimToPhylo	simToPhylo
SimulateGeoHiSSE	SimulateGeoHiSSE
SimulateHisse	simulateHisse
SummarizeMiSSEGreedy	SummarizeMiSSEGreedy
SupportRegion.old	supportRegion.old
SupportRegionGeoSSE	supportRegionGeoSSE
SupportRegionGeoSSE.old	supportRegionGeoSSE.old
SupportRegionHiSSE	supportRegionHiSSE
SupportRegionMiSSE	supportRegionMiSSE
SupportRegionMuHiSSE	supportRegionMuHiSSE
TipCorrelation	TipCorrelation
TranslateParsMakerGeoHiSSE	TranslateParsMakerGeoHiSSE
TransMatMaker.old	transMat
TransMatMakerGeoHiSSE	transMatMakerGeoHiSSE
TransMatMakerGeoHiSSE.old	transMatMakerGeoHiSSE
TransMatMakerHiSSE	transMatMakerHiSSE
TransMatMakerMuHiSSE	transMatMakerMuHiSSE
