# Visualising Splicing at Single-Cell Resolution

## Documentation for package ‘VALERIE’ version 1.1.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

ComputePSI | Percent spliced-in (PSI) computation
PlotPSI | Percent spliced-in (PSI) visualization for alternative splicing events
PlotPSI.A3SS.MultiGroups | Percent spliced in (PSI) visualization for alternative 3' splice sites (A3SS)
PlotPSI.A3SS.TwoGroups | Percent spliced in (PSI) visualization for alternative 3' splice sites (A3SS)
PlotPSI.A5SS.MultiGroups | Percent spliced-in (PSI) visualization for alternative 5' splice sites (A5SS)
PlotPSI.A5SS.TwoGroups | Percent spliced-in (PSI) visualization for alternative 5' splice sites (A5SS)
PlotPSI.MXE.MultiGroups | Percent spliced-in (PSI) visualization for mutually exclusive exons (MXE)
PlotPSI.MXE.TwoGroups | Percent spliced-in (PSI) visualization for mutually exclusive exons (MXE)
PlotPSI.RI.MultiGroups | Percent spliced-in (PSI) visualization for retained introns (RI)
PlotPSI.RI.TwoGroups | Percent spliced-in (PSI) visualization for retained introns (RI)
PlotPSI.SE.MultiGroups | Percent spliced-in (PSI) visualization for skipped exons (SE)
PlotPSI.SE.TwoGroups | Percent spliced-in (PSI) visualization for skipped exons (SE)