Package: treestats
Type: Package
Title: Phylogenetic Tree Statistics
Version: 1.0.5
Authors@R: c(person(given = "Thijs",
        family = "Janzen",
        email = "thijsjanzen@gmail.com",
        role = c("cre", "aut"),
        comment = c(ORCID = "0000-0002-4162-1140")))
Maintainer: Thijs Janzen <thijsjanzen@gmail.com>
Description: Collection of phylogenetic tree statistics,
             collected throughout the literature. All functions have been 
             written to maximize computation speed. The package includes 
             umbrella functions to calculate all statistics, all balance 
             associated statistics, or all branching time related statistics. 
             Furthermore, the 'treestats' package supports summary statistic 
             calculations on Ltables, provides speed-improved coding of 
             branching times, Ltable conversion and includes algorithms to
             create intermediately balanced trees. Full description can be
             found in Janzen (2023) <doi:10.1101/2024.01.24.576848>.
License: GPL-3
Encoding: UTF-8
RoxygenNote: 7.2.3
Depends: Rcpp
LinkingTo: Rcpp, nloptr
Imports: ape, nloptr, RSpectra, Matrix
Suggests: phyloTop, testthat, DDD, geiger, nodeSub, nLTT, castor,
        adephylo, ggplot2, tibble, picante, treebalance, RPANDA, lintr,
        rmarkdown, knitr
BugReports: https://github.com/thijsjanzen/treestats/issues
URL: https://github.com/thijsjanzen/treestats
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2024-01-30 13:59:36 UTC; thijsjanzen
Author: Thijs Janzen [cre, aut] (<https://orcid.org/0000-0002-4162-1140>)
Repository: CRAN
Date/Publication: 2024-01-30 15:50:02 UTC
Built: R 4.2.3; aarch64-apple-darwin20; 2024-01-30 17:19:59 UTC; unix
Archs: treestats.so.dSYM
