# Predict Regional Community Composition

## Documentation for package ‘spectre’ version 1.0.2

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

spectre-package | spectre
alpha_list | Matrix of predicted alpha diversity in each cell.
calc_commonness_error | calc_commonness_error
estimated_gamma | Total (estimated) species in the system.
generate_commonness_matrix_from_gdm | generate_commonness_matrix_from_gdm
minimal_example_data | List with example data created using the 'gdm' package
plot_commonness | plot_commonness
plot_error | plot_error
run_optimization_min_conf | run_optimization_min_conf
spectre | spectre
target_matrix | Pairwise matrix of species in common.